BLAST System: Difference between revisions
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* http://dove.embl-heidelberg.de/Blast2e/ | * http://dove.embl-heidelberg.de/Blast2e/ | ||
* http://blast.ncbi.nlm.nih.gov/Blast.cgi | * http://blast.ncbi.nlm.nih.gov/Blast.cgi | ||
** The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and evolutionary relationships between sequences as well as help identify members of gene families. | ** The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and evolutionary relationships between sequences as well as help identify members of gene families. | ||
=== 2009 === | === 2009 === | ||
* ([[2009_GenomeAndProteomeAnnotation|Reeves et al., 2009]]) ⇒ Gabrielle A Reeves, David Talavera, and Janet M Thornton. ([[2009]]). “[http://dx.doi.org/10.1098/rsif.2008.0341 Genome and Proteome Annotation: Organization, Interpretation and Integration].” In: J R Soc Interface, 6(31). | * ([[2009_GenomeAndProteomeAnnotation|Reeves et al., 2009]]) ⇒ Gabrielle A Reeves, David Talavera, and Janet M Thornton. ([[2009]]). “[http://dx.doi.org/10.1098/rsif.2008.0341 Genome and Proteome Annotation: Organization, Interpretation and Integration].” In: J R Soc Interface, 6(31). | ||
=== 1990 === | === 1990 === | ||
Revision as of 01:52, 5 January 2021
The BLAST System is a Computing System that finds regions of local similarity between Nucleotide Sequences and Protein Sequences by means of the BLAST Algorithm.
References
- ftp://ftp.ncbi.nlm.nih.gov/blast/
- http://dove.embl-heidelberg.de/Blast2e/
- http://blast.ncbi.nlm.nih.gov/Blast.cgi
- The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and evolutionary relationships between sequences as well as help identify members of gene families.
2009
- (Reeves et al., 2009) ⇒ Gabrielle A Reeves, David Talavera, and Janet M Thornton. (2009). “Genome and Proteome Annotation: Organization, Interpretation and Integration.” In: J R Soc Interface, 6(31).
1990
- (Altschul et al., 1990) ⇒ Stephen F. Altschul, Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman. (1990). “Basic Local Alignment Search Tool.” In: Journal Molecular Biology, 215.