Gene Expression Knowledge Base (KB)

A Gene Expression Knowledge Base (KB) is a biomedical knowledge base that contains gene expression records.

• Context:
  • It can (typically) contain information on Gene Expression Patterns, [[Gene Expression Profile]s, Gene Expression Regulation, and Gene-Expression Related Experimental Data.
  • It can serve as a resource for researchers, clinicians, and bioinformaticians working in Molecular Biology, Genetics, and Genomics.
  • It can support the study of gene expression in various organisms, including prokaryotes, eukaryotes, and viruses.
  • It can aid in investigating diseases, cellular differentiation, development, and organism adaptability.
  • It can be associated with a Gene Expression Data Source.
  • It can be supported by data visualization, analysis, and interpretation.
  • …
• Example(s):
  • Gene Expression Omnibus (GEO) https://ncbi.nlm.nih.gov/geo/.
  • The Cancer Genome Atlas (TCGA) https://cancer.gov/about-nci/organization/ccg/research/structural-genomics/tcga
  • ArrayExpress https://ebi.ac.uk/arrayexpress/.
  • Oncomine https://oncomine.com/
  • …
• Counter-Example(s):
  • Genomic KB.
  • Protein Localization KB.
• See: Gene Expression Process, Gene Expression Record, Gene Expression Regulation, Gene Expression Pattern, Gene Expression Profile, Microarray, RNA-Seq.

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